Scientists will try to crystallise a protein with a candidate drug to see how the drug binds to the protein and to determine how they can make the drug interact more strongly and specifically. If protein crystals don’t already sound science fiction enough, scientists often use a type of particle accelerator called a synchrotron to produce the specific type of high-energy light they need for this experiment. Why don’t they just use a microscope to look directly at the protein without worrying about making a crystal in the first place? This method involving crystal-reflected light patterns provides a far higher resolution structure of the protein than even the most advanced microscopes and has done so for the last 50 years!
A brilliant example of a cancer-causing protein successfully targeted by this crystal-mediated process is the Bcr-Abl fusion protein. Bcr and Abl are two different proteins that are separate from one another in healthy cells. In some people, there is a rare genetic event that causes the two proteins to fuse together to form the Bcr-Abl fusion protein. When these two proteins are fused together, the cell loses the ability to regulate the activity of these proteins, which causes chronic myeloid leukemia.
Armed with this knowledge, scientists targeted the Bcr-Abl fusion protein for drug design. Researchers carried out an iterative drug design process, where they generated crystals of the Bcr-Abl fusion protein that had been incubated with candidate drug-like compounds. After much research carefully analysing the structure of the protein in the presence of various drug-like compounds and further optimisation, the project eventually yielded the drug imatinib (marketed as Glivec or Gleevec).
Clinical trials demonstrated that imatinib was an effective drug against chronic myeloid leukaemia caused by the Bcr-Abl fusion protein. Some 98% of patients showed complete haematologic response after five years of imatinib therapy. This essentially means that their white blood cell count had returned to healthy, non-cancerous levels. Staggeringly, imatinib increased the survival rate of patients with chronic myeloid leukemia from 30% to 89% five years post diagnosis. Such was the success of the drug that imatinib made the cover of Time magazine in 2001 as the ‘magic bullet’ to cure this type of cancer. A life-saving discovery had been made through the use of protein crystals.
Protein crystals have played an essential role in the development of several other drugs for the treatment of numerous diseases, including swine flu, HIV and hepatitis C. The development of imatinib to treat chronic myeloid leukemia is a brilliant example of how we really can use crystals to cure cancer.
References
Druker, B. J., et al. Five-year follow-up of patients receiving imatinib for chronic myeloid leukemia, New England Journal of Medicine 355, 2408–2417 (2006)