Preclinical Molecular Imaging Group

Dr Gabriela Kramer-Marek’s group uses cutting-edge biomedical imaging techniques to gain information about the way particular genes drive cancer progression.

Our group’s long-term goal is to develop specific biomarkers for detecting cancers and to evaluate these biomarkers in pre-clinical cancer models

Notwithstanding the remarkable clinical success of mAb-based treatment regimens, not all patients benefit from them. This can be attributed, at least in part, to the complexity of the tumour microenvironment and its considerable heterogeneity both in terms of the tumour and non-tumour cell components. These phenomena represent a huge challenge in identifying predictive biomarkers and stratifying patient populations for personalised therapy approaches.

Therefore, there is an urgent need to develop assays that will help in three ways:

  1. accurate patient selection
  2. understanding intrinsic resistance mechanisms or the emergence of acquired resistance following treatment initiation and
  3. choosing the most effective combination regimen in circumstances in which single-agent therapies are insufficiently effective.

Currently, the baseline expression level of antigens targeted by therapeutic mAbs can be analysed by methods such as: immunohistochemistry (IHC), flow cytometry, proteomics, or next-generation sequencing of tumour tissues acquired at diagnostic biopsy or intra-operatively. These techniques aid our understanding of how cancer cells adapt to treatment and become resistant, but such methods are inherently invasive, prone to sampling errors caused by inter- and intra-tumour heterogeneity of receptor expression within analysed biopsy specimens and do not lend themselves readily to repeated sampling.

Positron emission tomography (PET), using radiolabelled mAbs, antibody fragments or engineered protein scaffolds (immuno-PET), has the potential to acquire information non-invasively and can be highly complementary to analyses based on tissue acquisition. Accordingly, immuno-PET agents might accurately identify the presence and accessibility of the target and provide a rapid assessment of tumour response to a variety of treatments in a timely fashion (e.g. within 1-2 weeks of treatment initiation).

Furthermore, immuno-PET agents can provide information about the heterogeneity of both target expression and therapeutic response, which are increasingly recognised as key factors in treatment resistance. This especially relates to patients with advanced disease in whom target expression may vary from site to site and a biopsy of a single local or metastatic deposit may not accurately reflect the situation across the entire disease burden. Although introduction of immuno-PET into routine clinical practice may add complexity and increase costs, with appropriate use this imaging modality has the potential to identify patients likely to benefit from therapy and assess the efficacy of novel target-specific drugs.

Against this background, our research focuses on the development and characterisation of targeted-PET radiotracers, including protein-based theranostic agents that enable smart monitoring of immunotherapies and expand opportunities for personalised medicine approaches.

Early diagnosis and individualized therapy have been recognized as crucial for the improvement of cancer treatment outcome. While proper molecular characterization of individual tumour types facilitates choice of the right therapeutic strategies, early assessment of tumour response to therapy could allow the physicians to discontinue ineffective treatment and offer the patient a more promising alternative. Therefore, the role of molecular imaging in elucidating molecular pathways involved in cancer progression and the ability to select the most effective therapy based on the unique biologic characteristics of the patient and the molecular properties of a tumour are undoubtedly of paramount importance.

The mission of this group is to investigate innovative imaging probes and apply them to novel orthotopic or metastatic models that are target driven, to gain information of the way particular oncogenes drive cancer progression through signalling pathways that can be imaged in vivo and, correlate it with target level ex vivo. Such an approach enables non-invasive assessment of biochemical target levels, target modulation and provides opportunities to optimize the drug dosing for maximum therapeutic effect, which leads to the development of better strategies for the more precise delivery of medicine.

The long term goal of our research is to develop specific imaging cancer biomarkers, especially for positron emission tomography (PET) as well as optical imaging and, evaluate these biomarkers in pre-clinical cancer models. Significant efforts are directed towards validating biomarkers for early prediction of treatment response, with the focus on new targeted therapies (such as inhibition of cell signalling pathways).

Our initial portfolio of imaging agents include radiolabelled affibody molecules, TK inhibitors and, conventional tracers that monitor universal markers of tumour physiology.

We are actively supported by other groups from the Division of Radiotherapy and Imaging as well as the Division of Cancer Therapeutics. Moreover, our close association with The Royal Marsden NHS Foundation Trust enables rapid translation of our research to early clinical studies and ensures a fast transition of know-how from the research laboratory to the patient bedside.

Dr Gabriela Kramer-Marek

Group Leader:

Preclinical Molecular Imaging Gabriela Kramer-Marek

Dr Gabriela Kramer-Marek is investigating new ways of molecular imaging in order to predict an individual patient’s response to treatment. Before moving to the ICR, she developed a new approach for non-invasive assessment of HER2 expression in breast cancer.

Researchers in this group

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Phone: 020 3437 6376

Email: [email protected]

Location: Sutton

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Phone: +44 20 3437 6785

Email: [email protected]

Location: Sutton

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Phone: +44 20 3437 6857

Email: [email protected]

Location: Sutton

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Phone: 020 3437 4549

Email: [email protected]

Location: Sutton

Dr Gabriela Kramer-Marek's group have written 63 publications

Most recent new publication 10/2024

See all their publications

Recent discoveries from this group

22/01/25 - by

Ovarian cancer is the sixth most common cancer in the UK, with around 7,500 new cases annually, and globally more than 300,000 women are diagnosed each year. This cancer is particularly difficult to catch in its early stages because its symptoms – which include bloating, abdominal pain, and changes in appetite – are often mistaken for a less serious condition. As a result, the majority of ovarian cancer cases are only discovered once the disease is advanced, when treatment options are limited and outcomes more uncertain.

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Headshot of Udai Banerji

Image: Professor Udai Banerji

The importance of research

The Institute of Cancer Research (ICR), which has played a key role in ovarian cancer research for decades, is committed to changing this and is tackling ovarian cancer’s specific challenges.

Professor Udai Banerji, Co-Director of the Drug Development Unit, Professor of Molecular Cancer Pharmacology at the ICR and Consultant Oncologist at The Royal Marsden NHS Foundation Trust, is among those working to find innovative ways to treat ovarian cancer.

“At the start of my career,” says Professor Banerji, “I had made up my mind to work in drug development and had to choose between working in cancer, infectious diseases or dementia. Choosing cancer was an easy decision for me because I saw a huge amount of research potential there.”

Through his work at the Drug Development Unit, Professor Banerji is contributing to the ICR’s efforts to make significant strides in ovarian cancer treatment. His research highlights the importance of developing tailored therapies that meet the specific needs of different ovarian cancer types and demonstrates the impact of targeted treatments in addressing this complex disease.

Types of ovarian cancer

  • High-grade serous ovarian cancer is the most common and aggressive form, making up approximately 60-70 per cent of epithelial ovarian cancers. It is characterised by rapidly growing tumours in the fallopian tubes.
  • Clear cellular ovarian cancer is a rare subtype often linked to endometriosis, representing 10 per cent of epithelial ovarian cancers. It typically shows resistance to chemotherapy.
  • Low-grade ovarian cancer is a less common and slower-growing form of ovarian cancer, representing 5-10 per cent of epithelial ovarian cancers. It usually arises from benign serous tumours.
  • There are also several less common subtypes including, but not limited to, mucinous ovarian cancer, endometrioid ovarian cancer, transitional cell carcinoma, undifferentiated carcinoma and germ cell ovarian cancer.

Organoid or ‘live mini tumours’ of high grade serous ovarian cancer

Image: Organoid or ‘live mini tumours’ of high grade serous ovarian cancer grown in ICR laboratories from samples of cancer cells isolated from patients. These live mini tumours are used for a host of research activities including studying the biology of ovarian cancer, discovering new cancer targets or testing new anticancer drugs on patient derived tumour.

Targeted drug development

Professor Banerji is actively involved in developing new drugs tailored to the different types of ovarian cancer.

Idetrexed: A targeted ‘Trojan horse’

Idetrexed is a drug that effectively acts like a ‘Trojan horse’. About a third of high-grade serous ovarian cancers express a protein called the folate receptor. This protein is tricked to bind to idetrexed, part of which is designed to mimic vitamin B9 (folic acid). The folate receptor transports the entire drug into the cancer cell thinking it is folic acid. However, part of the drug is actually a chemotherapy agent known as a thymidylate synthase inhibitor. This ensures that the cancer cells expressing the folate receptor are specifically targeted, while non-cancerous cells remain largely unaffected.

“As cancer cells have high levels of folate receptors compared to non-cancerous cells, idetrexed is selectively taken up by cancer cells, resulting in fewer side effects compared to chemotherapy. This makes it a smarter, kinder treatment,” says Professor Banerji.

MRI of tumour reducing in size over time after given idetrexed

Image: MRI of tumour reducing in size over time (10 months) after given idetrexed. Presented by Professor Udai Banerji at ASCO General Meeting 2017

NXP800: Addressing rare and treatment-resistant cancers

NXP800, a highly innovative drug discovered by the ICR, is designed to treat clear cell ovarian cancer, an often more resistant form of the disease with limited treatment options. The drug, which was discovered through pioneering research led by Professor Paul Workman at the Centre for Cancer Drug Discovery at the ICR, activates an enzyme that regulates cellular stress response. NXP800 targets pathways that cancer cells rely on to cope with the stress of their rapid growth and adverse tumour environments. Once these shields are down, the cells become vulnerable, have delayed growth and are susceptible to further treatment. Professor Workman’s team showed the drug was effective in models of clear cell ovarian cancer, which do not respond well to chemotherapy and often have a mutation in the ARID1A gene.

Professor Banerji played a leading role in the phase I trial of NXP800, which aimed to determine the appropriate dose and schedule for this drug during its first testing in people. Alongside studying and managing the side effects of NXP800, these trials provided critical insights into how the drug functioned in the human body. Professor Banerji’s research has demonstrated the same biological changes caused by NXP800 in laboratory experiments, in both the blood and tumour of patients, validating Professor Workman’s findings. After the results of the phase I trial for NXP800, Professor Banerji and his team were able to recommend a dosage, which is now being evaluated in patients with clear cellular ovarian cancer in an expanded international phase Ib trial being run by Professor Susana Banerjee at The Royal Marsden and the ICR.

“We work closely with The Royal Marsden, and a lot of the clinical trials performed in the Drug Development Unit go on to become phase III trials there. The bench-to-bedside journey is remarkable. We undertake the pioneering drug discovery and innovative early development before drugs are transitioned to world leading tumour type specific units at The Royal Marsden. The ICR is one of the very few places that has this breadth of expertise,” says Professor Banerji.

Combination therapy: avutometinib and defactinib

In 2019, Professor Banerji and his research team started a clinical trial that combined the drugs avutometinib and defactinib, which are designed to block signals that encourage cancer cells to grow. The trial used an unconventional intermittent dosing schedule, based on the team’s earlier experiments, which resulted in the combination being effective but also tolerable in terms of side effects.

Low-grade ovarian cancer is less responsive to chemotherapy due to its slow growth. It also has fewer genetic mutations, making it less reliant on the cellular pathways that chemotherapy typically targets. The clinical trial showed a reduction in tumour size and halted progression for more than 18 months, demonstrating a better response than chemotherapy in this ovarian cancer type. Later phase trials are now ongoing and have been led by Professor Susanna Banerjee. These trials have been designed to formally show a difference between current standard of care treatments and the new avutometinib and defactinib combination, which is a requirement if regulatory authorities decide to license a drug or drug combination therapy.

Professor Banerji says: “Effective combination therapy should by synergistic – the sum of the effectiveness of individual drugs should be greater than each individual drug’s efficacy. In this case defactinib on its own has very little activity but significantly increases the activity of avutometinib. Combining such drugs is challenging due to side effects such as fatigue, gastrointestinal issues or liver toxicity. Our novel intermittent dosing allowed us to hit the sweet spot between effectiveness and side effects.”

Innovative approaches to cancer treatment

Professor Banerji has a particular interest in overcoming drug resistance, and he is currently pioneering groundbreaking approaches such as evolutionary steering, which could transform how we approach the treatment of cancer, including ovarian cancer.

Evolutionary steering

Evolutionary steering is a unique approach that works to predict and influence how cancer cells will adapt. Using mathematical models and genetic insights, Professor Banerji and Professor Trevor Graham, Director of the Centre for Evolution and Cancer at the ICR, are trying to anticipate the path cancer cells might take in response to treatment.

By using evolutionary steering, researchers at the ICR aim to guide cancer cells into patterns that make them more vulnerable to subsequent treatments, essentially “herding” the cancer cells to a place where they are easier to treat. This process involves manipulating the tumour environment to favour cells that are less resistant to current treatments and maintaining a population of treatment-sensitive cells to supress treatment-resistant ones. These approaches may in the future, transform how we treat ovarian cancer.

Professor Graham says: “The biggest challenge, but also the biggest impact, would be if we can use the information obtained about evolutionary steering and other innovative approaches to design clinical trials and change practice. As we understand more, we might be able to rethink how we currently give chemotherapy, for example giving treatments sequentially rather than in combination. It does go against our current practice, so that's why it’s essential we get more evidence before we can think of using this in the clinic.”

Professor Banerji added: “By effectively playing chess with cancer cells, we can anticipate their moves and stay one step ahead. Ultimately, if we can predict cancer’s next move, we can beat it.”

High-Grade Serous Ovarian Carcinoma (HGSOC) organoids

Image: Patient-derived High-Grade Serous Ovarian Carcinoma (HGSOC) organoids grown, fixed and imaged in ICR laboratories. Cells were grown and taken from a liquid biopsy (ascites).

Funding challenges in ovarian cancer research

As ovarian cancer is commonly diagnosed at a later stage, curative treatment becomes more difficult due to the cancer becoming advanced. This emphasises the urgent need for new treatments or utilising existing therapies in a smarter way to improve outcomes for patients.

Professor Banerji’s work at the ICR is helping to shift this narrative. His promising work on idetrexed, NXP800 and the combination of avutometinib and defactinib, alongside his collaborations with Professor Graham into evolutionary steering, provides hope that we can transform the landscape of ovarian cancer treatment.

However, the relatively low level of funding for ovarian cancer is making it harder for researchers to carry out the innovative work needed to make new treatments available.

Professor Banerji says: "In the financial year 2020/21, the UK National Cancer Research Institute’s database shows that £10.3m was spent on ovarian cancer compared to £51.5m, £39.5m and £37.6m on breast, colorectal and lung cancer respectively."

Together, we can make a difference

Professor Banerji says: “My generation of researchers stands on the shoulders of previous oncology research giants at the ICR, who pioneered paradigm-shifting drugs – such as carboplatin, the biological discoveries of the BRCA2 gene and the concept of synthetic lethality, which guided how we use PARP inhibitor drugs like olaparib.

“There are often entire laboratories and clinical teams that make stepwise changes in cancer therapy. At the ICR we have a wide range of teams focused on biology, drug discovery, radiotherapy, imaging and clinical trials working on ovarian cancer. In collaboration with our partners at The Royal Marsden, we make a formidable team of committed researchers in different disciplines, all very passionate about our work.

“Supporting ovarian cancer research is essential to fuelling the discoveries that could lead to better therapies and, ultimately, improved outcomes for women worldwide.”

By drawing attention to the unique demands in ovarian cancer research, we aim to secure the crucial resources required to drive the next breakthroughs in ovarian cancer treatment.

With your support, we can ensure that ovarian cancer research is funded at a level that truly reflects its impact on the lives of women and their families around the world.

By advancing the groundbreaking work carried out by Professor Banerji and his colleagues, we can work towards a future where ovarian cancer is no longer a stealthy killer but a disease that we can understand, manage, and even overcome.

Our research is helping more women survive cancer. Please donate today and support the vital work our scientists are doing to defeat cancer.

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